He and his colleagues chose those two species because they essentially built the Florida Reef. They also grow the fastest among all Florida Reef corals, which means they are essential for its ability to recover from damage. “Acropora corals were the primary reef builders for the last ten thousand years,” Cunning said. Unfortunately, they also showed the highest levels of mortality due to heat waves.

Coral apocalypse

Cunning’s team found the mortality rate among Acropora corals reached 100 percent in the Dry Tortugas National Park, which is at the southernmost end of the Florida Reef. Moving north to Lower Keys, Middle Keys, and most of the Upper Keys, the mortality stayed at between 98 and 100 percent.

“Once you start moving a little bit further north, there’s the Biscayne National Park, where mortality rates were at 90 percent,” Cunning said. “It wasn’t until the furthest northern extent of the reef in Miami and Broward counties where mortality dropped to just 38 percent thanks to cooler temperatures that occurred there.”

Still, the mortality rate was exceptionally high throughout most of Acropora colonies across the Florida Reef. “What we’re facing is a functional extinction,” Cunning said.

But corals have been around for about 460 million years, and they have survived multiple mass extinction events, including the one that wiped out the dinosaurs. As vulnerable as they appear, corals seemingly have some get-out-of-death card they always pull when things turn really bad for them. This card, most likely, is buried deep in their genome.

Ancestral strength

“There have been studies looking into the evolutionary history of corals, but the difference between those and our work lies in technology,” said Claudia Francesca Vaga, a marine biologist at the Smithsonian Institution.

Her team looked at ultra conserved elements, stretches of DNA that are nearly identical across even distantly related species. These elements were used to build the most extensive phylogenetic tree of corals to date. Based on the genomic data and fossil evidence, Vaga’s team analyzed how 274 stony coral species are related to one another to retrace their common ancestor and reconstruct how they evolved from it.